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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11175856_11177068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11175856 - 11177068

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATGAC

U12 Branch Point Sequence:

TCAGCTATGACA

Flanking Amino Acid:

TASTRGFYLNQSTAYNFNPK

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

71.6

33.8

Major BPS

62.4

0.31

1.1

55.1

40.4

Major PPT

89.6

0.89

0.6

84.7

22.9

Minor 5ss

32.8

-2

2.7

42.3

38.4

Minor BPS

-0

1.7

59.51

40.6

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020919

11157051 - 11183544

26494

ENSAPLT00000004369

11157297 - 11184272

26976