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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11177965_11178165_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11177965 - 11178165

Intron Length:

201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTACTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TGTCTCTCTACT

Flanking Amino Acid:

LSVFTEGDLGDSGKRKKKGT

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

61.3

0.28

52.7

34.2

Major PPT

78.5

0.64

0.8

35.2

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

52.2

0.15

1.9

74.69

41.5

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004369

11157297 - 11184272

26976

ENSAPLT00000020919

11157051 - 11183544

26494