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Intron Name: Anas_platyrhynchos_platyrhynchos_20_11178310_11178459_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11178310 - 11178459

Intron Length:

150

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTATCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

TTTTGTTTATCA

Flanking Amino Acid:

QEGSLLKVVEEPYTVREARI

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.14

0.7

85.2

29.9

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

85.5

0.8

0.9

85.7

33.5

Minor 5ss

31.1

-2.2

3.8

44.6

43.4

Minor BPS

61.9

0.37

78.76

38.3

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020919

11157051 - 11183544

26494

ENSAPLT00000004369

11157297 - 11184272

26976