Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_11178632_11179772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11178632 - 11179772

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTGCG

5'SS Class:

major

3'SS Sequence:

TTGCCCCCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CTGACAGTAACT

Flanking Amino Acid:

APGIEPFSLQVSPQEMVQEI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.2

60.8

44.2

Major BPS

54.4

0.11

1.2

36.4

Major PPT

66.2

0.37

68.9

Minor 5ss

37.5

-1.4

3.3

50.5

Minor BPS

47.7

-0.1

2.3

69.67

46.8

Associated Gene:

Gene:

CLUH

Ensembl Gene ID:

ENSAPLG00000004181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020919

11157051 - 11183544

26494

ENSAPLT00000004369

11157297 - 11184272

26976