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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1132491_1179218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1132491 - 1179218

Intron Length:

46728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

CCGTGTCTAACT

Flanking Amino Acid:

GNTIDSIFWQFDMQRITLEE

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

81.3

0.71

0.7

76.1

26.1

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

47.2

-0.1

2.1

63.53

47.1

Associated Gene:

Gene:

CALN1

Ensembl Gene ID:

ENSAPLG00000015773

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018456

1062585 - 1185379

122795

ENSAPLT00000016435

1075116 - 1185379

110264

ENSAPLT00000023343

1054039 - 1179422

125384