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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1225800_1235300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1225800 - 1235300

Intron Length:

9501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

AGATACTGATGG

Flanking Amino Acid:

LYPCHGWGPQLARYTKEGFL

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.6

37.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

70.2

0.46

0.8

61.1

35.1

Minor 5ss

28.5

-2.5

3.1

39.7

45.9

Minor BPS

39.9

-0.9

41.75

42.1

Associated Gene:

Gene:

GALNT17

Ensembl Gene ID:

ENSAPLG00000004368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016510

1224856 - 1387250

162395

ENSAPLT00000004480

1224856 - 1435825

210970