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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1240251_1298108_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1240251 - 1298108

Intron Length:

57858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GGTTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GCTGATGGAAGT

Flanking Amino Acid:

GGENIELGIKVWLCGGSMEV

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

74.9

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

75.9

0.58

69.1

41.8

Minor 5ss

30.2

-2.3

3.3

38.5

46.8

Minor BPS

35.6

-1

2.2

49.65

44.1

Associated Gene:

Gene:

GALNT17

Ensembl Gene ID:

ENSAPLG00000004368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016510

1224856 - 1387250

162395

ENSAPLT00000004480

1224856 - 1435825

210970