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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1298227_1345970_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1298227 - 1345970

Intron Length:

47744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTTCTCTTCATA

Flanking Amino Acid:

WDAGDPSLPIRTPAMIGCSF

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.5

39.1

Major BPS

0.82

0.8

24.9

Major PPT

81.6

0.71

0.8

76.6

31.1

Minor 5ss

33.4

-1.9

3.1

43.8

43.9

Minor BPS

62.9

0.4

1.7

76.1

35.4

Associated Gene:

Gene:

GALNT17

Ensembl Gene ID:

ENSAPLG00000004368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016510

1224856 - 1387250

162395

ENSAPLT00000004480

1224856 - 1435825

210970