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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1348423_1356949_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1348423 - 1356949

Intron Length:

8527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTCCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

GTGTCTTTACAA

Flanking Amino Acid:

IILVDDNSDEEELKAPLEEY

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.9

28.7

Major BPS

73.5

0.59

81.3

29.9

Major PPT

75.3

0.57

0.8

66.9

34.8

Minor 5ss

37.5

-1.4

2.8

51.6

44.9

Minor BPS

55.3

0.16

1.7

65.01

41.5

Associated Gene:

Gene:

GALNT17

Ensembl Gene ID:

ENSAPLG00000004368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016510

1224856 - 1387250

162395

ENSAPLT00000004480

1224856 - 1435825

210970