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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1357117_1379219_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1357117 - 1379219

Intron Length:

22103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TTCTCTTTTTCT

Flanking Amino Acid:

DRSIPDYRPTKCKELKYGKD

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

79.1

0.65

0.9

37.4

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

45.3

-0.2

3.6

79.47

Associated Gene:

Gene:

GALNT17

Ensembl Gene ID:

ENSAPLG00000004368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004480

1224856 - 1435825

210970

ENSAPLT00000016510

1224856 - 1387250

162395