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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1378827_1379219_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1378827 - 1379219

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCTGTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

CGTGCCAGGACT

Flanking Amino Acid:

DRSIPDYRPTNSFMSLQHLR

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

0.54

0.9

31.9

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

47.1

-0.1

1.9

65.78

44.6

Associated Gene:

Gene:

GALNT17

Ensembl Gene ID:

ENSAPLG00000004368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036238

1378628 - 1435825

57198