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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1379404_1435587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1379404 - 1435587

Intron Length:

56184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGAGCG

5'SS Class:

major

3'SS Sequence:

TCTTTCTCTCGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

ATGAATTTAACA

Flanking Amino Acid:

LEDIVYRQLNGLSKSLGLIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

56.1

41.5

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

66.4

0.37

1.7

73.4

37.1

Minor 5ss

29.5

-2.3

3.5

35.6

42.2

Minor BPS

60.2

0.32

1.5

67.54

38.6

Associated Gene:

Gene:

GALNT17

Ensembl Gene ID:

ENSAPLG00000004368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036238

1378628 - 1435825

57198

ENSAPLT00000004480

1224856 - 1435825

210970