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Intron Name: Anas_platyrhynchos_platyrhynchos_20_138837_138928_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

138837 - 138928

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTGTTTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTGTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCTGTCTCCACA

Flanking Amino Acid:

GCSLWFSHTMVEEIRGFIDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.2

65.5

40.7

Major BPS

72.7

0.56

30.1

Major PPT

78.2

0.64

0.8

72.3

32.5

Minor 5ss

41.3

-1

3.1

56.1

42.6

Minor BPS

47.6

-0.1

2.1

62.43

44.3

Associated Gene:

Gene:

STX1A

Ensembl Gene ID:

ENSAPLG00000006044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006280

60795 - 139656

78862