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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1531754_1532709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1531754 - 1532709

Intron Length:

956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

TTTGCTTTGTTT

Flanking Amino Acid:

PGHPAGSTYSEQDLLRQELN

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

28.9

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

80.3

0.68

76.9

42.1

Minor 5ss

30.7

-2.2

3.3

40.8

45.7

Minor BPS

-0.3

3.5

78.01

39.5

Associated Gene:

Gene:

AUTS2

Ensembl Gene ID:

ENSAPLG00000004514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031576

1508359 - 2025780

517422

ENSAPLT00000026322

1508359 - 2025780

517422

ENSAPLT00000004650

1508359 - 1742960

234602

ENSAPLT00000044887

1508359 - 2025780

517422

ENSAPLT00000038867

1508359 - 2025780

517422