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Intron Name: Anas_platyrhynchos_platyrhynchos_20_1579630_1742978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1579630 - 1742978

Intron Length:

163349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTGGTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTTATT

Flanking Amino Acid:

CDSDSDQEEKASDASSEKLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.3

0.64

0.9

74.1

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

63.1

0.49

1.6

78.47

38.5

Associated Gene:

Gene:

AUTS2

Ensembl Gene ID:

ENSAPLG00000004514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038867

1508359 - 2025780

517422

ENSAPLT00000031576

1508359 - 2025780

517422

ENSAPLT00000026322

1508359 - 2025780

517422

ENSAPLT00000044887

1508359 - 2025780

517422