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Intron Name: Anas_platyrhynchos_platyrhynchos_20_18073_18630_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18073 - 18630

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCTACATCT

Flanking Amino Acid:

MVMQCLLPLAC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

100

1.24

0.5

100

Major PPT

84.5

0.78

0.7

77.5

31.2

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

52.1

0.14

2.1

81.24

40.4

Associated Gene:

Gene:

VPS37D

Ensembl Gene ID:

ENSAPLG00000025155

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029505

17946 - 21469

3524

ENSAPLT00000005832

17946 - 39185

21240