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Intron Name: Anas_platyrhynchos_platyrhynchos_20_182981_183525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

182981 - 183525

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAT

5'SS Class:

strong_major

3'SS Sequence:

GTCCTGTGGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

GTTGTCTAAATT

Flanking Amino Acid:

YGSLVLPASPGLHILTIPTW

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

0.9

36.4

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

61.6

0.26

1.1

60.7

44.7

Minor 5ss

-1.9

3.3

47.4

Minor BPS

58.4

0.34

1.8

75.64

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006881

182778 - 192659

9882