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Intron Name: Anas_platyrhynchos_platyrhynchos_20_183634_184946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

183634 - 184946

Intron Length:

1313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CAGCTTTTAAAA

Flanking Amino Acid:

MFFSQENESEDCLPQWPVLY

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.4

39.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

89.9

0.9

0.6

84.8

22.8

Minor 5ss

37.7

-1.4

3.2

52.9

44.2

Minor BPS

50.6

0.01

1.4

54.46

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006881

182778 - 192659

9882