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Intron Name: Anas_platyrhynchos_platyrhynchos_20_210318_213141_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
210318 - 213141

Intron Length:
2824

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGGAA

5'SS Class:
strong_major

3'SS Sequence:
TTTCTCATTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTTTAATAATT

Flanking Amino Acid:
KEEPVPLETQDPDGQTRRAA

Intron Amino Acid Position:
231

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90
0.94
0.8
78.3
31.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
87.9
0.85
0.7
85.8
27

Minor 5ss
28.5
-2.5
3.5
37.1
47.5

Minor BPS
62.1
0.46
1.8
85.83
33.8

Associated Gene:

Gene:
BCL7B

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

208370 - 215679
7310