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Intron Name: Anas_platyrhynchos_platyrhynchos_20_212687_213141_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
212687 - 213141

Intron Length:
455

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGGAA

5'SS Class:
strong_major

3'SS Sequence:
CTGGGTTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTCAC

U12 Branch Point Sequence:
GCTCCTGTCACT

Flanking Amino Acid:
KEEPVPLETQVTEEEEDSGA

Intron Amino Acid Position:
173

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
90
0.94
0.8
78.3
31.1

Major BPS
62.6
0.31
1.2
66.7
39.9

Major PPT
75.4
0.57
1
68.6
42

Minor 5ss
28.5
-2.5
3.5
37.1
47.5

Minor BPS
45.4
-0.2
2.3
65.47
45.3

Associated Gene:

Gene:
BCL7B

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

212010 - 215679
3670

212010 - 215768
3759