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Intron Name: Anas_platyrhynchos_platyrhynchos_20_213222_213455_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
213222 - 213455

Intron Length:
234

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGGGCTCT

5'SS Class:
major

3'SS Sequence:
CTGTTCCTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTTAA

U12 Branch Point Sequence:
CTGTTGTTAACC

Flanking Amino Acid:
PPTLGQETLEEPSLPSSEVA

Intron Amino Acid Position:
146

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1
68.4
39.3

Major BPS
72.1
0.55
1.2
63.7
43.9

Major PPT
82
0.72
0.8
73.4
37.1

Minor 5ss
39.6
-1.2
3.3
56.2
48.2

Minor BPS
58.1
0.23
2.1
69.13
43

Associated Gene:

Gene:
BCL7B

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

212010 - 215679
3670

208370 - 215679
7310

212010 - 215768
3759