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Intron Name: Anas_platyrhynchos_platyrhynchos_20_213627_214985_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
213627 - 214985

Intron Length:
1359

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGCCTG

5'SS Class:
strong_major

3'SS Sequence:
GCTGTTTCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAC

U12 Branch Point Sequence:
CTCTTCTTCACT

Flanking Amino Acid:
ANSSLLLEFQDENSNQSSLS

Intron Amino Acid Position:
89

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.7
0.79
0.9
68.8
43.8

Major BPS
77.5
0.68
1
79.6
33

Major PPT
79.2
0.66
0.9
73
37.4

Minor 5ss
36
-1.6
3.2
46.7
48.6

Minor BPS
64.4
0.53
1.8
78.66
44.1

Associated Gene:

Gene:
BCL7B

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

212010 - 215679
3670

208370 - 215679
7310

212010 - 215768
3759