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Intron Name: Anas_platyrhynchos_platyrhynchos_20_215083_215337_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
215083 - 215337

Intron Length:
255

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGCGCC

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTCCTCAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCTT

U12 Branch Point Sequence:
TCTTTCCTCAAG

Flanking Amino Acid:
KWVPVADSKEKEKSKSSSSS

Intron Amino Acid Position:
57

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84
0.8
0.9
69.3
35.8

Major BPS
39.5
-0.6
4.3
85.7
34.9

Major PPT
76.9
0.61
1
75.9
33.1

Minor 5ss
32.2
-2
3.3
41.8
45.1

Minor BPS
45.4
-0.5
2.2
56.57
44.8

Associated Gene:

Gene:
BCL7B

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

212010 - 215679
3670

208370 - 215679
7310

212010 - 215768
3759