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Intron Name: Anas_platyrhynchos_platyrhynchos_20_25005_25356_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25005 - 25356

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAAACCC

5'SS Class:

weak_major

3'SS Sequence:

CAGGCCCCATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TTTGCTCAGACC

Flanking Amino Acid:

SGDCASSLMLPLNSANHGGR

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.3

49.4

39.7

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

56.6

0.15

52.3

37.6

Minor 5ss

28.1

-2.5

2.9

32.5

35.4

Minor BPS

47.1

-0.2

2.1

65.93

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005654

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005840

24960 - 27490

2531