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Intron Name: Anas_platyrhynchos_platyrhynchos_20_2638677_2640142_R

Intron Information:

Intron Rank:

131231

Intron Class:

major

Intron Phase:

Intron Coordinates:

2638677 - 2640142

Intron Length:

1466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGAATGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGAAT

U12 Branch Point Sequence:

TGTCCCTTGAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

62.3

0.31

1.4

73.3

39.1

Major PPT

73.5

0.53

69.6

45.6

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

70.3

0.72

1.4

83.31

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033185

2626949 - 2640180

13232