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Intron Name: Anas_platyrhynchos_platyrhynchos_20_2650364_2659610_R

Intron Information:

Intron Rank:

155559

Intron Class:

major

Intron Phase:

Intron Coordinates:

2650364 - 2659610

Intron Length:

9247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

ATCATTTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.1

39.9

Major BPS

89.7

0.98

0.7

89.9

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

46.4

-0.4

3.1

63.6

48.1

Minor BPS

68.9

0.67

1.2

78.29

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030618

2649344 - 2661444

12101

ENSAPLT00000039639

2649344 - 2659795

10452