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Intron Name: Anas_platyrhynchos_platyrhynchos_20_2685321_2686432_R

Intron Information:

Intron Rank:

145504

Intron Class:

major

Intron Phase:

Intron Coordinates:

2685321 - 2686432

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CGTGTGTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

GCTTTTTGCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

85.3

32.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

76.8

0.6

72.6

42.4

Minor 5ss

39.9

-1.1

2.8

46.6

41.8

Minor BPS

47.6

-0.2

1.9

58.9

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025677

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044864

2684046 - 2686672

2627