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Intron Name: Anas_platyrhynchos_platyrhynchos_20_2875388_2940169_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2875388 - 2940169

Intron Length:

64782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

AAAGGCTAATCC

Flanking Amino Acid:

IKLAFLSSKTRCKFFSLTET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

74.6

0.55

41.8

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

39.8

-0.7

2.2

46.39

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004779

2875275 - 2994745

119471