Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_2940241_2984587_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2940241 - 2984587

Intron Length:

44347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

TAAACCAAACCT

Flanking Amino Acid:

TIIVDEEGFLELPSSEHLSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

32.7

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

86.1

0.81

0.8

80.7

31.3

Minor 5ss

35.9

-1.6

3.5

51.5

45.7

Minor BPS

-0.3

2.1

64.03

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004779

2875275 - 2994745

119471