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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3010635_3011699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3010635 - 3011699

Intron Length:

1065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TATTGTGATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTACAGAATT

Flanking Amino Acid:

CGGTGNAVLTEEGNVFVWGY

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

75.6

36.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

72.3

0.5

1.1

66.3

44.1

Minor 5ss

34.9

-1.7

3.4

45.9

49.3

Minor BPS

51.2

0.12

1.9

75.03

41.5

Associated Gene:

Gene:

RCC1L

Ensembl Gene ID:

ENSAPLG00000004807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004983

3007601 - 3022270

14670