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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3015201_3016512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3015201 - 3016512

Intron Length:

1312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CTTTCCTGACCA

Flanking Amino Acid:

LNDFDSRVVQVVCGQDHSLF

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

68.9

0.47

59.2

39.1

Major PPT

77.9

0.63

72.9

42.2

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

63.8

0.43

1.8

76.11

41.2

Associated Gene:

Gene:

RCC1L

Ensembl Gene ID:

ENSAPLG00000004807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004983

3007601 - 3022270

14670