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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3016565_3017669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3016565 - 3017669

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TGGTGGTGTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCTT

U12 Branch Point Sequence:

TTTTCTCTTCTT

Flanking Amino Acid:

GRKIVEDEIYSESHLIHQLN

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

84.1

26.4

Major BPS

37.5

-0.7

4.3

79.6

35.6

Major PPT

63.7

0.31

1.1

53.8

49.8

Minor 5ss

32.6

-2

42.8

44.4

Minor BPS

39.9

-0.7

3.7

76.22

40.8

Associated Gene:

Gene:

RCC1L

Ensembl Gene ID:

ENSAPLG00000004807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004983

3007601 - 3022270

14670