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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3018741_3021091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3018741 - 3021091

Intron Length:

2351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TCTATTCCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTTTCTCTATT

Flanking Amino Acid:

LGFQRSIRDRTKGYEYVLEP

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

85.3

31.4

Major BPS

81.9

0.79

0.9

80.1

Major PPT

72.5

0.51

76.1

32.8

Minor 5ss

39.9

-1.1

3.4

40.7

Minor BPS

0.43

1.8

83.71

37.3

Associated Gene:

Gene:

RCC1L

Ensembl Gene ID:

ENSAPLG00000004807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004983

3007601 - 3022270

14670