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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3024648_3026255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3024648 - 3026255

Intron Length:

1608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TGACTCGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TCATTTCTGACT

Flanking Amino Acid:

ELRNRSVPPRRSTIRNAKSI

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

69.4

0.44

62.2

39.6

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

0.21

1.6

71.62

39.7

Associated Gene:

Gene:

NCF1

Ensembl Gene ID:

ENSAPLG00000005084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005255

3023761 - 3032762

9002