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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3026364_3027071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3026364 - 3027071

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTCACCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAA

U12 Branch Point Sequence:

TCTTGTGTCACC

Flanking Amino Acid:

HKLLDGWWVVRKDESTGYYP

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

74.6

28.6

Major BPS

61.8

0.29

1.1

63.4

35.6

Major PPT

74.3

0.55

0.9

66.6

35.2

Minor 5ss

25.3

-2.8

3.2

31.7

42.9

Minor BPS

-0.5

2.6

60.93

45.2

Associated Gene:

Gene:

NCF1

Ensembl Gene ID:

ENSAPLG00000005084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005255

3023761 - 3032762

9002