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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3099353_3100346_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3099353 - 3100346

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTCTTTTTACA

Flanking Amino Acid:

TFLMSALESMCKELAKSKAE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

66.5

44.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

95.3

1.02

0.5

91.2

20.6

Minor 5ss

31.6

-2.1

2.4

32.3

35.5

Minor BPS

63.5

0.42

1.6

76.13

34.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033212

3085453 - 3100445

14993