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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3113637_3114289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3113637 - 3114289

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAAGCCT

5'SS Class:

major

3'SS Sequence:

CCCTCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAACAG

U12 Branch Point Sequence:

TTTTCTCTCCCT

Flanking Amino Acid:

TSSTNQISLVQWPMNMYMLD

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

62.1

42.1

Major BPS

-0.3

1.5

52.7

41.6

Major PPT

82.5

0.73

0.7

79.8

25.7

Minor 5ss

32.9

-2

3.5

45.2

43.9

Minor BPS

41.3

-0.5

3.7

80.09

42.2

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024