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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3114236_3114289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3114236 - 3114289

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAAGCCT

5'SS Class:

major

3'SS Sequence:

CTTTCTGCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAA

U12 Branch Point Sequence:

TACTGCCTACCT

Flanking Amino Acid:

TSSTNQISLVDAALCSPRTV

Intron Amino Acid Position:

865

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

62.1

42.1

Major BPS

66.7

0.42

58.1

38.5

Major PPT

83.2

0.75

0.8

80.9

31.2

Minor 5ss

32.9

-2

3.5

45.2

43.9

Minor BPS

46.6

-0.1

2.3

69.55

46.9

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007184

3114176 - 3152585

38410