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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3114417_3115768_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3114417 - 3115768

Intron Length:

1352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTCC

5'SS Class:

major

3'SS Sequence:

CAGAAAAAGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

TCTCTCCCCACA

Flanking Amino Acid:

SIRMVIINQLHSVPKRKRKR

Intron Amino Acid Position:

822

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

69.9

35.6

Major BPS

73.5

0.58

73.6

32.5

Major PPT

46.4

-0.2

1.1

32.9

Minor 5ss

43.7

-0.7

2.7

59.7

38.5

Minor BPS

42.6

-0.5

2.1

57.29

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007184

3114176 - 3152585

38410

ENSAPLT00000044340

3113562 - 3152585

39024