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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3115962_3117241_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3115962 - 3117241

Intron Length:

1280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTAAA

U12 Branch Point Sequence:

TCTGCCCTTACA

Flanking Amino Acid:

QVKELFNEKYGEALGLNRPV

Intron Amino Acid Position:

758

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

46.9

-0.1

1.4

47.4

44.6

Major PPT

79.8

0.67

0.8

72.5

32.3

Minor 5ss

33.8

-1.8

45.5

42.6

Minor BPS

50.8

0.02

2.1

68.09

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410