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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3117320_3124908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3117320 - 3124908

Intron Length:

7589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

GAGGTTTTATTC

Flanking Amino Acid:

RPFQGLIPKPDEDDANRLGE

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.5

34.4

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

89.9

0.9

0.7

84.7

30.1

Minor 5ss

32.6

-2

3.5

48.1

47.5

Minor BPS

45.4

-0.3

1.6

46.87

37.1

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410