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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3124938_3125568_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3124938 - 3125568

Intron Length:

631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

TTCCTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTCCTTTTAACA

Flanking Amino Acid:

VADKIKFTVTRPFQGLIPKP

Intron Amino Acid Position:

722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

63.1

39.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

83.1

0.74

0.8

80.2

30.3

Minor 5ss

30.9

-2.2

3.4

42.7

44.4

Minor BPS

71.9

0.68

1.2

75.92

35.5

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410