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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3125753_3126516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3125753 - 3126516

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTTAC

U12 Branch Point Sequence:

GCACGCTTACCT

Flanking Amino Acid:

QVQDLFNKKYGEALGIKYPV

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

76.5

33.7

Major BPS

0.1

1.2

46.7

38.6

Major PPT

82.1

0.72

0.8

73.1

37.3

Minor 5ss

28.6

-2.5

3.2

36.4

Minor BPS

47.4

-0.1

2.1

62.91

46.6

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410