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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3128866_3129925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3128866 - 3129925

Intron Length:

1060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCTGG

5'SS Class:

major

3'SS Sequence:

GGTCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

GGCAAACTAACC

Flanking Amino Acid:

QVEILFNTRYAKAIGISEPV

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

44.6

Major BPS

0.45

0.9

67.6

25.3

Major PPT

69.1

0.43

0.9

34.7

Minor 5ss

38.3

-1.3

47.3

48.1

Minor BPS

41.2

-0.6

48.34

40.1

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410