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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3129992_3132531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3129992 - 3132531

Intron Length:

2540

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCATCTCCC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TTTCTCAGAGCA

Flanking Amino Acid:

EFCLEKIHVWDGIGDVLSHL

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.4

59.5

43.7

Major BPS

0.52

1.5

79.6

35.6

Major PPT

1.1

0.4

13.8

Minor 5ss

36.4

-1.5

3.8

45.3

42.8

Minor BPS

47.3

-0.2

1.9

66.87

38.9

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410