Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_313333_314996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

313333 - 314996

Intron Length:

1664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CTCCTTTTAACA

Flanking Amino Acid:

PVNGADIDELVIQTKKTTRR

Intron Amino Acid Position:

1303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.7

34.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

68.1

0.41

1.2

65.2

45.5

Minor 5ss

31.8

-2.1

3.3

40.1

39.9

Minor BPS

64.9

0.46

1.3

67.58

39.4

Associated Gene:

Gene:

BAZ1B

Ensembl Gene ID:

ENSAPLG00000007529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042007

266140 - 317580

51441

ENSAPLT00000007833

266140 - 316838

50699