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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3136497_3138828_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3136497 - 3138828

Intron Length:

2332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CACCTGGCACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATTCCAAACC

Flanking Amino Acid:

KRMFDERIFTGSKFTKDPTK

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

56.2

0.14

46.9

40.1

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

49.7

-0

64.91

40.3

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410