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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3138855_3139755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3138855 - 3139755

Intron Length:

901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTTCTAATCC

Flanking Amino Acid:

ERHNIHFVIKRMFDERIFTG

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.9

0.63

0.7

69.6

31.2

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

56.3

0.18

1.9

70.87

40.6

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007184

3114176 - 3152585

38410

ENSAPLT00000044340

3113562 - 3152585

39024