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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3139940_3140686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3139940 - 3140686

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

GTTCACCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

GTACACTGAAGT

Flanking Amino Acid:

CVQILFNSRYAEALGLDHMV

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.5

41.3

Major BPS

0.3

34.1

Major PPT

78.4

0.64

0.9

73.9

36.4

Minor 5ss

29.8

-2.3

2.6

30.3

36.7

Minor BPS

47.4

-0.1

1.9

65.75

43.6

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410