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Intron Name: Anas_platyrhynchos_platyrhynchos_20_3142438_3143589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3142438 - 3143589

Intron Length:

1152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

HSHSIRFRLKRPADEPSREP

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.6

29.3

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

91.5

0.93

0.6

89.8

18.5

Minor 5ss

40.6

-1.1

2.7

51.2

45.1

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

GTF2IRD1

Ensembl Gene ID:

ENSAPLG00000006811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044340

3113562 - 3152585

39024

ENSAPLT00000007184

3114176 - 3152585

38410